Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899782.1_cds_XP_016449807.1_44319
CDS Infomation

[gene=LOC107774696] [db_xref=GeneID:107774696] [protein=DEAD-box ATP-dependent RNA helicase 56-like] [protein_id=XP_016449807.1] [location=complement(join(90992..91002,91421..91484,92709..92792,92888..93032,103695..103879,103960..104016,104537..104655,104897..105128,105238..105410,111172..111272,113148..113263))] [gbkey=CDS]
Sequence

ATGGGAGACACAAAGGAGAACGATGCTTACGAGGAGGAGCTTCTCGACTACGAAGAAGAT
GACGAAAAAGCCCCTGATTCCATCTCCGCTAAAGTTAATGGCGAGTCCGCCAAGAAGGGT
TACGTTGGCATTCACAGTTCTGGATTCAGAGACTTTCTGCTAAAGCCAGAGCTATTGCGG
GCTATTGTAGATTCAGGGTTTGAGCATCCGTCTGAAGTGCAACATGAGTGTATTCCACAA
GCAATCCTAGGCATGGATGTTATTTGTCAAGCTAAATCTGGAATGGGCAAAACTGCTGTT
TTTGTCCTTTCAACTCTGCAACAGATTGAACCTGTTGCTGGTCAAGTTGCTGCCATGGTT
CTATGTCACACAAGGGAATTAGCTTATCAGATCTGTCATGAATTTGAGAGGTTCAGCACT
TATTTGCCTGATATCAAAGTTGCTGTTTTCTATGGTGGTGTCAATATCAAACTTCACAAG
GAGCTTCTGAAGAATGAATGCCCTCATATAGTTGTTGGAACTCCCGGAAGAATGCTTGCA
TTGGCTAGAGACAAGGACCTGTCTTTGAGGAACGTGAGGCATTTTATACTGGATGAATGC
GACAAAATGCTTGAATCACTTGATATGAGAAGAGATGTGCAGACAATCTTCAAGATGACT
CCTCATGACAAGCAAGTAATGATGTTTTCAGCAACACTCAGCAAAGAGATTCGCCCTGTT
TGCAAGAAATTTATGCAAGATCCAATGGAAATTTATGTTGACGACGAGGCCAAGTTGACC
CTTCATGGACTTGTACAGCACTACATCAAATTGAGCGAAACGGAGAAGAACCGGAAGCTG
AATGACCTGCTGGATGCTTTGGATTTCAATCAAGTTGTTATATTTGTCAAGAGCGTGAGC
AGAGCAGCACAGCTGAACAAGTTGCTTGTTGAGTGCAATTTTCCATCTATCTGCATCCAC
TCTGGCATGACTCAGGAAGAGAGATTGACTCGCTACAAGAATTTCAAGGAGGGGCACAAG
AGAATTCTTGTTGCAACTGATTTGGTTGGCAGGGGCATTGACATTGAAAGGGTTAACATC
GTTATTAACTATGACATGCCAGATTCCGCAGATACTTATCTTCACAGAGTTGGTAGAGCT
GGTAGGTTTGGAACTAAAGGTCTTGCCATCACATTTGTGTCATCTGCATCAGATTCTGAT
GTTCTTAACCAGGTTCAGGAGAGGTTCGAAGTGGATATAAAAGAGCTTCCTGAGCAGATT
GATACTTCTACATACATGCCATCATAG

Peptide Sequence

PEP ID

XP_016449807.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana tabacum]
Sequence

MGDTKENDAYEEELLDYEEDDEKAPDSISAKVNGESAKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAAMV
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKLHKELLKNECPHIVVGTPGRMLA
LARDKDLSLRNVRHFILDECDKMLESLDMRRDVQTIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSETEKNRKLNDLLDALDFNQVVIFVKSVS
RAAQLNKLLVECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS

Transcript Sequence

Gene sequence data has not been registered.